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The San Francisco Navy Yards were facilities at Earth: some on Mare Island in San Francisco and assembly facilities in orbit. The yards were run by the Federation Starfleet. (ST website: Startrek.com)
In 2245 the USS Enterprise was built there. Captain Robert April was at the orbital drydock section of the facility when the major components of the Enterprise were built and put together. (ST website: Startrek.com, TAS episode: "The Counter-Clock Incident")